Publications

Yuxuan Sun, Hao Wu, Chenglu Zhu, Yixuan Si, Qizi Chen, Yunlong Zhang, Kai Zhang, Jingxiong Li, Jiatong Cai, Yuhan Wang, Lin Sun, Tao Lin, Lin Yang (2025). PathBench: Advancing the Benchmark of Large Multimodal Models for Pathology Image Understanding at Patch and Whole Slide Level. IEEE Transactions on Medical Imaging.

Yuxuan Sun, Yixuan Si, Chenglu Zhu, Kai Zhang, Zhongyi Shui, Bowen Ding, Tao Lin, Lin Yang (2025). CPathAgent: An Agent-based Foundation Model for Interpretable High-Resolution Pathology Image Analysis Mimicking Pathologists' Diagnostic Logic. arXiv.

Yuxuan Sun, Yixuan Si, Chenglu Zhu, Xuan Gong, Kai Zhang, Pingyi Chen, Ye Zhang, Zhongyi Shui, Tao Lin, Lin Yang (2025). CPath-Omni: A Unified Multimodal Foundation Model for Patch and Whole Slide Image Analysis in Computational Pathology. 2025 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR).

Honglin Li, Zhongyi Shui, Yunlong Zhang, Chenglu Zhu, Lin Yang (2025). PathVQ: Reforming Computational Pathology Foundation Model for Whole Slide Image Analysis via Vector Quantization. arXiv.

Pingyi Chen, Chenglu Zhu, Sunyi Zheng, Honglin Li, Lin Yang (2025). WSI-VQA: Interpreting Whole Slide Images by Generative Visual Question Answering. Computer Vision – ECCV 2024.

Zhongyi Shui, Yunlong Zhang, Kai Yao, Chenglu Zhu, Sunyi Zheng, Jingxiong Li, Honglin Li, Yuxuan Sun, Ruizhe Guo, Lin Yang (2025). Unleashing the Power of Prompt-Driven Nucleus Instance Segmentation. Computer Vision – ECCV 2024.

Jingxiong Li, Chenglu Zhu, Sunyi Zheng, Pingyi Chen, Yuxuan Sun, Honglin Li, Lin Yang (2025). ToPoFM: Topology-Guided Pathology Foundation Model for High-Resolution Pathology Image Synthesis with Cellular-Level Control. IEEE Transactions on Medical Imaging.

Yuxuan Sun, Hao Wu, Chenglu Zhu, Sunyi Zheng, Qizi Chen, Kai Zhang, Yunlong Zhang, Dan Wan, Xiaoxiao Lan, Mengyue Zheng, Jingxiong Li, Xinheng Lyu, Tao Lin, Lin Yang (2025). PathMMU: A Massive Multimodal Expert-Level Benchmark for Understanding and Reasoning in Pathology. Computer Vision – ECCV 2024.

Yunlong Zhang, Honglin Li, Yunxuan Sun, Sunyi Zheng, Chenglu Zhu, Lin Yang (2025). Attention-Challenging Multiple Instance Learning for Whole Slide Image Classification. Computer Vision – ECCV 2024.

Honglin Li, Yunlong Zhang, Pingyi Chen, Zhongyi Shui, Chenglu Zhu, Lin Yang (2024). Rethinking Transformer for Long Contextual Histopathology Whole Slide Image Analysis. arXiv.